> For the complete documentation index, see [llms.txt](https://ashrithsagar.gitbook.io/classification-fungal10x/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://ashrithsagar.gitbook.io/classification-fungal10x/installation.md).

# Installation

1. Clone the repository.

   ```bash
   git clone https://github.com/AshrithSagar/Classification-Fungal10x.git
   cd Classification-Fungal10x
   ```
2. Optionally, create a virtual environment and activate it.

   ```bash
   python3 -m venv .venv
   source .venv/bin/activate
   ```

   Or use `conda` to create a virtual environment.

   ```bash
   conda create --name clfx python=3.9
   conda activate clfx
   ```
3. Install the required packages.

   ```bash
   pip install -r requirements.txt
   ```

## Additional loss functions

Used by model CLAM.

(Preferably install it somewhere outside the project directory.)

```bash
git clone https://github.com/oval-group/smooth-topk.git
pip install smooth-topk/
```